CRISPRone

CRISPRone report for GCA_900687595.1_7614_4_55

♦ Seq 1: CAACZS010000005.1 Clostridioides difficile strain lsh18 genome assembly, contig: ERS080222SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 278000 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 86267-87615 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAACZS010000006.1 Clostridioides difficile strain lsh18 genome assembly, contig: ERS080222SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 256971 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17773-18001 bp]: array | spacers
           [Locus range 192638-193657 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAACZS010000008.1 Clostridioides difficile strain lsh18 genome assembly, contig: ERS080222SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 216086 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90955-91707 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAACZS010000001.1 Clostridioides difficile strain lsh18 genome assembly, contig: ERS080222SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 850170 bp; # of CRISPR array = 3; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 144371-144528 bp]: array | spacers
           [Locus range 557300-558583 bp]: array | spacers
           [Locus range 805414-805703 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)