CRISPRone

CRISPRone report for GCA_900687955.1_7614_4_69

♦ Seq 1: CAADAI010000007.1 Clostridioides difficile strain lsh33 genome assembly, contig: ERS080236SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 210780 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90960-92242 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADAI010000008.1 Clostridioides difficile strain lsh33 genome assembly, contig: ERS080236SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 210239 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 64491-65381 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADAI010000005.1 Clostridioides difficile strain lsh33 genome assembly, contig: ERS080236SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 249768 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4193-4947 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAADAI010000004.1 Clostridioides difficile strain lsh33 genome assembly, contig: ERS080236SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 295618 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18519-18880 bp]: array | spacers
           [Locus range 98330-98621 bp]: array | spacers
           [Locus range 237378-238998 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAADAI010000003.1 Clostridioides difficile strain lsh33 genome assembly, contig: ERS080236SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 339665 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91701-91862 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAADAI010000001.1 Clostridioides difficile strain lsh33 genome assembly, contig: ERS080236SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 1027906 bp; # of CRISPR array = 3; # of cas gene = 20  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 242849-244203 bp]: array | spacers
           [Locus range 555587-556997 bp]: array | spacers
           [Locus range 772423-774686 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)