CRISPRone

CRISPRone report for GCA_900688555.1_7614_7_46

♦ Seq 1: CAADAX010000013.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000013, whole genome shotgun sequence

⇒Summary: seq-len = 132062 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13904-13998 bp]: array | spacers
           [Locus range 15780-16666 bp]: array | spacers
           [Locus range 17269-17626 bp]: array | spacers
           [Locus range 17688-17780 bp]: array | spacers
           [Locus range 113367-113990 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADAX010000081.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000081, whole genome shotgun sequence

⇒Summary: seq-len = 450 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-212 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADAX010000088.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000088, whole genome shotgun sequence

⇒Summary: seq-len = 417 bp; # of CRISPR array = 0; # of cas gene = 1  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAADAX010000083.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000083, whole genome shotgun sequence

⇒Summary: seq-len = 445 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 32-454 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAADAX010000008.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 194947 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 68840-69858 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAADAX010000006.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 217982 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91597-92088 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAADAX010000003.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 324926 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 267310-267471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CAADAX010000001.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 806362 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 248223-248317 bp]: array | spacers
           [Locus range 516795-517221 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: CAADAX010000028.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000028, whole genome shotgun sequence

⇒Summary: seq-len = 19545 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9081-9305 bp]: array | spacers
           [Locus range 12728-12952 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: CAADAX010000085.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000085, whole genome shotgun sequence

⇒Summary: seq-len = 438 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22-447 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: CAADAX010000073.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000073, whole genome shotgun sequence

⇒Summary: seq-len = 527 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4-231 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: CAADAX010000065.1 Clostridioides difficile strain lsh09 genome assembly, contig: ERS080213SCcontig000065, whole genome shotgun sequence

⇒Summary: seq-len = 562 bp; # of CRISPR array = 1; # of cas gene = 1  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 471-566 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)