CRISPRone

CRISPRone report for GCA_900688565.1_7614_7_47

♦ Seq 1: CAADAW010000009.1 Clostridioides difficile strain lsh10 genome assembly, contig: ERS080214SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 194153 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 148232-148590 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADAW010000030.1 Clostridioides difficile strain lsh10 genome assembly, contig: ERS080214SCcontig000030, whole genome shotgun sequence

⇒Summary: seq-len = 22641 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 11316-11477 bp]: array | spacers
           [Locus range 12079-12703 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADAW010000003.1 Clostridioides difficile strain lsh10 genome assembly, contig: ERS080214SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 347075 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 94666-95748 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAADAW010000014.1 Clostridioides difficile strain lsh10 genome assembly, contig: ERS080214SCcontig000014, whole genome shotgun sequence

⇒Summary: seq-len = 112761 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 59816-60895 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAADAW010000001.1 Clostridioides difficile strain lsh10 genome assembly, contig: ERS080214SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 545970 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45105-46515 bp]: array | spacers
           [Locus range 92185-92411 bp]: array | spacers
           [Locus range 407254-408992 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAADAW010000016.1 Clostridioides difficile strain lsh10 genome assembly, contig: ERS080214SCcontig000016, whole genome shotgun sequence

⇒Summary: seq-len = 96838 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 78539-79096 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAADAW010000002.1 Clostridioides difficile strain lsh10 genome assembly, contig: ERS080214SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 488773 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90896-91251 bp]: array | spacers
           [Locus range 296856-297475 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CAADAW010000006.1 Clostridioides difficile strain lsh10 genome assembly, contig: ERS080214SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 206116 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 140158-141829 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)