CRISPRone

CRISPRone report for GCA_900688895.1_8080_1_51

♦ Seq 1: CAADBK010000003.1 Clostridioides difficile strain 078LVP020 genome assembly, contig: ERS138149SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 260556 bp; # of CRISPR array = 0; # of cas gene = 9  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADBK010000020.1 Clostridioides difficile strain 078LVP020 genome assembly, contig: ERS138149SCcontig000020, whole genome shotgun sequence

⇒Summary: seq-len = 76025 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1631-2780 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADBK010000009.1 Clostridioides difficile strain 078LVP020 genome assembly, contig: ERS138149SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 147254 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 125741-127862 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAADBK010000011.1 Clostridioides difficile strain 078LVP020 genome assembly, contig: ERS138149SCcontig000011, whole genome shotgun sequence

⇒Summary: seq-len = 140779 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 74344-76943 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAADBK010000002.1 Clostridioides difficile strain 078LVP020 genome assembly, contig: ERS138149SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 311965 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 104051-104677 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAADBK010000001.1 Clostridioides difficile strain 078LVP020 genome assembly, contig: ERS138149SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 323694 bp; # of CRISPR array = 2; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 45807-46621 bp]: array | spacers
           [Locus range 93569-96434 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)