CRISPRone

CRISPRone report for GCA_900690005.1_8140_6_19

♦ Seq 1: CAADCJ010000007.1 Clostridioides difficile strain LSHTM-19 genome assembly, contig: ERS139865SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 237810 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8140-8434 bp]: array | spacers
           [Locus range 99062-99681 bp]: array | spacers
           [Locus range 208941-209101 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADCJ010000002.1 Clostridioides difficile strain LSHTM-19 genome assembly, contig: ERS139865SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 345354 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 247068-247424 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADCJ010000001.1 Clostridioides difficile strain LSHTM-19 genome assembly, contig: ERS139865SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 376602 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182399-182493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAADCJ010000003.1 Clostridioides difficile strain LSHTM-19 genome assembly, contig: ERS139865SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 290392 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 125864-126284 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)