CRISPRone
CRISPRone report for GCA_900690015.1_8140_6_22
♦ Seq 1: CAADCK010000002.1 Clostridioides difficile strain LSHTM-22 genome assembly, contig: ERS139868SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 345456 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III) 
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 247001-247226 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: CAADCK010000001.1 Clostridioides difficile strain LSHTM-22 genome assembly, contig: ERS139868SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 376656 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 194164-194259 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAADCK010000032.1 Clostridioides difficile strain LSHTM-22 genome assembly, contig: ERS139868SCcontig000032, whole genome shotgun sequence
⇒Summary: seq-len = 12607 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 5438-5665 bp]: array | spacers
[Locus range 8332-8493 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAADCK010000003.1 Clostridioides difficile strain LSHTM-22 genome assembly, contig: ERS139868SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 290552 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 126025-126445 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: CAADCK010000007.1 Clostridioides difficile strain LSHTM-22 genome assembly, contig: ERS139868SCcontig000007, whole genome shotgun sequence
⇒Summary: seq-len = 220728 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 81831-82450 bp]: array | spacers
[Locus range 191710-191870 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 194164-194259 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAADCK010000032.1 Clostridioides difficile strain LSHTM-22 genome assembly, contig: ERS139868SCcontig000032, whole genome shotgun sequence
⇒Summary: seq-len = 12607 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 5438-5665 bp]: array | spacers
[Locus range 8332-8493 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAADCK010000003.1 Clostridioides difficile strain LSHTM-22 genome assembly, contig: ERS139868SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 290552 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 126025-126445 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: CAADCK010000007.1 Clostridioides difficile strain LSHTM-22 genome assembly, contig: ERS139868SCcontig000007, whole genome shotgun sequence
⇒Summary: seq-len = 220728 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 81831-82450 bp]: array | spacers
[Locus range 191710-191870 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 126025-126445 bp]: array | spacers