CRISPRone
CRISPRone report for GCA_900690065.1_8140_6_34
♦ Seq 1: CAADCM010000001.1 Clostridioides difficile strain LSHTM-34 genome assembly, contig: ERS139880SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 585386 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III) 
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 486947-487172 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: CAADCM010000034.1 Clostridioides difficile strain LSHTM-34 genome assembly, contig: ERS139880SCcontig000034, whole genome shotgun sequence
⇒Summary: seq-len = 11596 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 4990-5150 bp]: array | spacers
[Locus range 7818-8044 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAADCM010000006.1 Clostridioides difficile strain LSHTM-34 genome assembly, contig: ERS139880SCcontig000006, whole genome shotgun sequence
⇒Summary: seq-len = 218151 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 29022-29183 bp]: array | spacers
[Locus range 138442-139062 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAADCM010000002.1 Clostridioides difficile strain LSHTM-34 genome assembly, contig: ERS139880SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 376687 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 194139-194234 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: CAADCM010000003.1 Clostridioides difficile strain LSHTM-34 genome assembly, contig: ERS139880SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 293553 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 128876-129296 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 4990-5150 bp]: array | spacers
[Locus range 7818-8044 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAADCM010000006.1 Clostridioides difficile strain LSHTM-34 genome assembly, contig: ERS139880SCcontig000006, whole genome shotgun sequence
⇒Summary: seq-len = 218151 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 29022-29183 bp]: array | spacers
[Locus range 138442-139062 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAADCM010000002.1 Clostridioides difficile strain LSHTM-34 genome assembly, contig: ERS139880SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 376687 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 194139-194234 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: CAADCM010000003.1 Clostridioides difficile strain LSHTM-34 genome assembly, contig: ERS139880SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 293553 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 128876-129296 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 194139-194234 bp]: array | spacers