CRISPRone

CRISPRone report for GCA_900690425.1_8140_6_60

♦ Seq 1: CAADCV010000001.1 Clostridioides difficile strain LSHTM-60 genome assembly, contig: ERS139906SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 376656 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 194164-194259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADCV010000002.1 Clostridioides difficile strain LSHTM-60 genome assembly, contig: ERS139906SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 345504 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 247067-247292 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADCV010000003.1 Clostridioides difficile strain LSHTM-60 genome assembly, contig: ERS139906SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 293559 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 164266-164685 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAADCV010000007.1 Clostridioides difficile strain LSHTM-60 genome assembly, contig: ERS139906SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 244940 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28859-29020 bp]: array | spacers
           [Locus range 138279-138899 bp]: array | spacers
           [Locus range 229748-229975 bp]: array | spacers
           [Locus range 232642-232803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)