CRISPRone

CRISPRone report for GCA_900706935.1_AND01-020

♦ Seq 1: CAADJN010000296.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_349_length_8502_cov_17.356739, whole genome shotgun sequence

⇒Summary: seq-len = 8532 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 121-8531 bp Zoom in on locus 1 x2 Gene: cd09718:cas1 Type: universal Location: 121-1095 bp Gene: COG1203:cas3 Type: Type-I Location: 1092-4322 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4380-5684 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5671-6654 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 6665-7693 bp Gene: cd09739:cas6f Type: other Location: 7697-8260 bp CRISPR array Location: 8444-8531 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 8444-8531 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8444-8531 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)