CRISPRone

CRISPRone report for GCA_900706965.1_37277_F01

♦ Seq 1: CAADJP010000006.1 Pseudomonas aeruginosa strain NCTC13621 genome assembly, contig: ERS666356SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 797173 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 213316-223832 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 213316-213834 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 213316-213834 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 214607-217288 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 217291-218859 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 219097-219387 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 219397-220539 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 220541-221203 bp Gene: pfam08798:cas6e Type: other Location: 221178-221789 bp Gene: COG1518:cas1 Type: universal Location: 221816-222184 bp Gene: cd09719:cas1 Type: universal Location: 222299-222709 bp Gene: pfam09707:cas2 Type: universal Location: 222706-223005 bp CRISPR array Location: 223070-223832 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 223070-223832 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 213316-213834 bp]: array | spacers
           [Locus range 223070-223832 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)