CRISPRone

CRISPRone report for GCA_900706975.1_35891_E01

♦ Seq 1: CAADJQ010000008.1 Pseudomonas aeruginosa strain NCTC12951 genome assembly, contig: ERS647588SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 4162813 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 171223-181822 bp 2 Locus 2: 1795444-1796192 bp Zoom in on locus 1 x10 x19 Zoom in on locus 2 x13 CRISPR array Location: 171223-171791 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 171223-171791 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 172042-173016 bp Gene: COG1203:cas3 Type: Type-I Location: 173013-176243 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 176654-177955 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 177942-178925 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 178936-179964 bp Gene: cd09739:cas6f Type: other Location: 179968-180531 bp CRISPR array Location: 180715-181822 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 180715-181822 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 1795444-1796192 bp Num of repeats: 13 Spacers: s28-s39 CRISPR array Location: 1795444-1796192 bp Num of repeats: 13 Spacers: s28-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 171223-171791 bp]: array | spacers
           [Locus range 180715-181822 bp]: array | spacers
           [Locus range 1795444-1796192 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)