CRISPRone

CRISPRone report for GCA_900707045.1_AND01-040

♦ Seq 1: CAADJY010000098.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_123_length_13240_cov_42.095394, whole genome shotgun sequence

⇒Summary: seq-len = 13270 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4954-13268 bp Zoom in on locus 1 x3 CRISPR array Location: 4954-5106 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 4954-5106 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09641:cas3HD Type: Type-I Location: 5881-8562 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 8565-10133 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 10130-10660 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 10670-11812 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 11814-12476 bp Gene: pfam08798:cas6e Type: other Location: 12451-13062 bp Gene: cd09719:cas1 Type: universal Location: 13089-13268 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4954-5106 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADJY010000492.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_625_length_1067_cov_47.742268, whole genome shotgun sequence

⇒Summary: seq-len = 1097 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94-1094 bp Zoom in on locus 1 Gene: pfam09707:cas2 Type: universal Location: 94-393 bp Gene: COG1518:cas1 Type: universal Location: 390-1094 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)