CRISPRone

CRISPRone report for GCA_900707485.1_CAN01-037

♦ Seq 1: CAADLR010000803.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_2111_length_828_cov_23.640097, whole genome shotgun sequence

⇒Summary: seq-len = 858 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-90 bp Zoom in on locus 1 x2 CRISPR array Location: 3-90 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 3-90 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3-90 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADLR010000222.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_252_length_8662_cov_38.440197, whole genome shotgun sequence

⇒Summary: seq-len = 8692 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 281-8690 bp Zoom in on locus 1 x2 Gene: cd09718:cas1 Type: universal Location: 281-1255 bp Gene: COG1203:cas3 Type: Type-I Location: 1252-4482 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4540-5844 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5831-6814 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 6825-7853 bp Gene: cd09739:cas6f Type: other Location: 7857-8420 bp CRISPR array Location: 8604-8690 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 8604-8690 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8604-8690 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)