CRISPRone

CRISPRone report for GCA_900707545.1_BAL03-003

♦ Seq 1: CAADLW010000481.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_715_length_8555_cov_52.123669, whole genome shotgun sequence

⇒Summary: seq-len = 8585 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-8582 bp Zoom in on locus 1 x2 CRISPR array Location: 2-92 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 2-92 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09641:cas3HD Type: Type-I Location: 865-3546 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 3549-5117 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 5114-5644 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 5654-6796 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 6798-7460 bp Gene: pfam08798:cas6e Type: other Location: 7435-8046 bp Gene: COG1518:cas1 Type: universal Location: 8073-8582 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2-92 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADLW010001337.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_2690_length_740_cov_52.462162, whole genome shotgun sequence

⇒Summary: seq-len = 770 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 93-769 bp Zoom in on locus 1 Gene: pfam09707:cas2 Type: universal Location: 93-392 bp Gene: cd09719:cas1 Type: universal Location: 389-769 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADLW010001207.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_2193_length_3701_cov_31.570387, whole genome shotgun sequence

⇒Summary: seq-len = 3731 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3641-3730 bp Zoom in on locus 1 x2 CRISPR array Location: 3641-3730 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 3641-3730 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3641-3730 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)