CRISPRone

CRISPRone report for GCA_900707665.1_CAT04-016

♦ Seq 1: CAADMI010000069.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_77_length_9245_cov_30.187344, whole genome shotgun sequence

⇒Summary: seq-len = 9275 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4297-8999 bp Zoom in on locus 1 Gene: cd09673:cas3f Type: Subtype-I-F Location: 4297-5061 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5119-6423 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6410-7393 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7404-8432 bp Gene: cd09739:cas6f Type: other Location: 8436-8999 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADMI010000504.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_654_length_20037_cov_34.629288, whole genome shotgun sequence

⇒Summary: seq-len = 20067 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 291-3622 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 291-1265 bp Gene: COG1203:cas3 Type: Type-I Location: 1262-3622 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADMI010000875.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_1451_length_592_cov_21.951014, whole genome shotgun sequence

⇒Summary: seq-len = 622 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 534-622 bp Zoom in on locus 1 x2 CRISPR array Location: 534-622 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 534-622 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 534-622 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)