CRISPRone

CRISPRone report for GCA_900707785.1_CAT06-023

♦ Seq 1: CAADMU010000211.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_263_length_8731_cov_30.304661, whole genome shotgun sequence

⇒Summary: seq-len = 8761 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-8759 bp Zoom in on locus 1 x2 x2 CRISPR array Location: 0-88 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 0-88 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09718:cas1 Type: universal Location: 349-1323 bp Gene: COG1203:cas3 Type: Type-I Location: 1320-4550 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4608-5912 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5899-6882 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 6893-7921 bp Gene: cd09739:cas6f Type: other Location: 7925-8488 bp CRISPR array Location: 8672-8759 bp Num of repeats: 2 Spacers: s2-s2 CRISPR array Location: 8672-8759 bp Num of repeats: 2 Spacers: s2-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-88 bp]: array | spacers
           [Locus range 8672-8759 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADMU010000187.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_237_length_16818_cov_30.839102, whole genome shotgun sequence

⇒Summary: seq-len = 16848 bp; # of CRISPR array = 0; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4294-10265 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 4294-6006 bp Gene: pfam13280:WYL Type: other Location: 6065-7081 bp Gene: pfam13280:WYL Type: other Location: 9390-10265 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)