CRISPRone

CRISPRone report for GCA_900707885.1_CAT09-027

♦ Seq 1: CAADNS010000452.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_589_length_8122_cov_26.564270, whole genome shotgun sequence

⇒Summary: seq-len = 8152 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-3856 bp Zoom in on locus 1 Gene: cd09736:cas5f Type: Subtype-I-F Location: 1-1743 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1730-3034 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 3092-3856 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADNS010000634.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_920_length_539_cov_14.933209, whole genome shotgun sequence

⇒Summary: seq-len = 569 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 481-569 bp Zoom in on locus 1 x2 CRISPR array Location: 481-569 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 481-569 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 481-569 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADNS010000567.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_773_length_1122_cov_24.973263, whole genome shotgun sequence

⇒Summary: seq-len = 1152 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 277-1149 bp Zoom in on locus 1 Gene: cd09739:cas6f Type: other Location: 277-840 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 844-1149 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAADNS010000644.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_950_length_8978_cov_27.326353, whole genome shotgun sequence

⇒Summary: seq-len = 9008 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5387-8718 bp Zoom in on locus 1 Gene: COG1203:cas3 Type: Type-I Location: 5387-7747 bp Gene: cd09718:cas1 Type: universal Location: 7744-8718 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)