CRISPRone

CRISPRone report for GCA_900707895.1_CAT09-028

♦ Seq 1: CAADNE010000610.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_886_length_8671_cov_30.566025, whole genome shotgun sequence

⇒Summary: seq-len = 8701 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-8411 bp Zoom in on locus 1 x2 CRISPR array Location: 1-89 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1-89 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09739:cas6f Type: other Location: 272-835 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 839-1867 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1878-2861 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2848-4152 bp Gene: COG1203:cas3 Type: Type-I Location: 4210-7440 bp Gene: cd09718:cas1 Type: universal Location: 7437-8411 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1-89 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADNE010000046.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_57_length_8742_cov_31.447838, whole genome shotgun sequence

⇒Summary: seq-len = 8772 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94-8771 bp Zoom in on locus 1 x2 Gene: pfam09707:cas2 Type: universal Location: 94-393 bp Gene: cd09719:cas1 Type: universal Location: 390-701 bp Gene: pfam08798:cas6e Type: other Location: 728-1267 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 1314-1976 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 1978-3120 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 3130-3660 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 3657-5225 bp Gene: cd09641:cas3HD Type: Type-I Location: 5228-7909 bp CRISPR array Location: 8682-8771 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 8682-8771 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8682-8771 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)