CRISPRone

CRISPRone report for GCA_900708115.1_CVA02-023

♦ Seq 1: CAADOB010000067.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_80_length_43557_cov_22.725830, whole genome shotgun sequence

⇒Summary: seq-len = 43587 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26039-32827 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 26039-27070 bp Gene: unk Type: unknown Location: 27063-27380 bp Gene: unk Type: unknown Location: 27515-28405 bp Gene: pfam13280:WYL Type: other Location: 28685-29593 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 29606-32827 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADOB010000511.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_892_length_524_cov_24.410305, whole genome shotgun sequence

⇒Summary: seq-len = 554 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-91 bp Zoom in on locus 1 x2 CRISPR array Location: 3-91 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 3-91 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3-91 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)