CRISPRone

CRISPRone report for GCA_900708265.1_GAL02-019

♦ Seq 1: CAADOP010001943.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_3492_length_1993_cov_107.693932, whole genome shotgun sequence

⇒Summary: seq-len = 2023 bp; # of CRISPR array = 1; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-2021 bp Zoom in on locus 1 x2 Gene: cd09736:cas5f Type: Subtype-I-F Location: 3-143 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 154-1182 bp Gene: cd09739:cas6f Type: other Location: 1186-1749 bp CRISPR array Location: 1934-2021 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1934-2021 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1934-2021 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADOP010001348.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_2158_length_1651_cov_92.863113, whole genome shotgun sequence

⇒Summary: seq-len = 1681 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-88 bp Zoom in on locus 1 x2 CRISPR array Location: 1-88 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1-88 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-88 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADOP010001027.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_1552_length_702_cov_86.900284, whole genome shotgun sequence

⇒Summary: seq-len = 732 bp; # of CRISPR array = 1; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-729 bp Zoom in on locus 1 x2 CRISPR array Location: 0-88 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 0-88 bp Num of repeats: 2 Spacers: s1-s1 Gene: COG1518:cas1 Type: universal Location: 349-729 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-88 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAADOP010000287.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_388_length_5984_cov_104.337067, whole genome shotgun sequence

⇒Summary: seq-len = 6014 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-6013 bp Zoom in on locus 1 Gene: cd09736:cas5f Type: Subtype-I-F Location: 2-844 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 831-2135 bp Gene: COG1203:cas3 Type: Type-I Location: 2193-5423 bp Gene: COG1518:cas1 Type: universal Location: 5420-6013 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)