CRISPRone

CRISPRone report for GCA_900708345.1_GAL05-014

♦ Seq 1: CAADOW010000636.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_1107_length_9021_cov_13.977386, whole genome shotgun sequence

⇒Summary: seq-len = 9051 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-8761 bp Zoom in on locus 1 x2 CRISPR array Location: 0-88 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 0-88 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09739:cas6f Type: other Location: 272-835 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 839-1867 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1878-2861 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2848-4149 bp Gene: COG1203:cas3 Type: Type-I Location: 4560-7790 bp Gene: cd09718:cas1 Type: universal Location: 7787-8761 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-88 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADOW010000712.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_1432_length_581_cov_10.111876, whole genome shotgun sequence

⇒Summary: seq-len = 611 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-148 bp Zoom in on locus 1 x3 CRISPR array Location: 0-148 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 0-148 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-148 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)