CRISPRone

CRISPRone report for GCA_900708465.1_MAD02-005

♦ Seq 1: CAADPL010000875.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_2715_length_548_cov_31.905109, whole genome shotgun sequence

⇒Summary: seq-len = 578 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 465-552 bp Zoom in on locus 1 x2 CRISPR array Location: 465-552 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 465-552 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 465-552 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADPL010000025.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_28_length_60952_cov_26.206785, whole genome shotgun sequence

⇒Summary: seq-len = 60982 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 43434-50222 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 43434-44465 bp Gene: unk Type: unknown Location: 44458-44775 bp Gene: unk Type: unknown Location: 44910-45800 bp Gene: pfam13280:WYL Type: other Location: 46080-46988 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 47001-50222 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAADPL010000371.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_492_length_24456_cov_16.644669, whole genome shotgun sequence

⇒Summary: seq-len = 24486 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4579-10051 bp Zoom in on locus 1 Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 4579-5229 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 5236-6279 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 6279-7034 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 7063-7788 bp Gene: cd09708:DinG Type: Subtype-IV-A Location: 7877-10051 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)