CRISPRone

CRISPRone report for GCA_900708585.1_MAD03-038

♦ Seq 1: CAADPX010000750.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_976_length_8673_cov_31.417156, whole genome shotgun sequence

⇒Summary: seq-len = 8703 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-8413 bp Zoom in on locus 1 x2 CRISPR array Location: 2-90 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 2-90 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09739:cas6f Type: other Location: 274-837 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 841-1869 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1880-2863 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2850-4154 bp Gene: COG1203:cas3 Type: Type-I Location: 4212-7442 bp Gene: cd09718:cas1 Type: universal Location: 7439-8413 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2-90 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)