CRISPRone

CRISPRone report for GCA_900708735.1_MAD05-020

♦ Seq 1: CAADQM010000655.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_861_length_8672_cov_50.268681, whole genome shotgun sequence

⇒Summary: seq-len = 8702 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-8412 bp Zoom in on locus 1 x2 CRISPR array Location: 2-90 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 2-90 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09739:cas6f Type: other Location: 273-836 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 840-1868 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1879-2862 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2849-4153 bp Gene: COG1203:cas3 Type: Type-I Location: 4211-7441 bp Gene: cd09718:cas1 Type: universal Location: 7438-8412 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2-90 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)