CRISPRone

CRISPRone report for GCA_900708795.1_MUR01-026

♦ Seq 1: CAADQR010000348.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_422_length_29172_cov_38.146065, whole genome shotgun sequence

⇒Summary: seq-len = 29202 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7512-14300 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 7512-10733 bp Gene: pfam13280:WYL Type: other Location: 10746-11654 bp Gene: unk Type: unknown Location: 11934-12824 bp Gene: unk Type: unknown Location: 12959-13276 bp Gene: mkCas0115:csx3 Type: other Location: 13269-14300 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADQR010000569.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_775_length_524_cov_37.732826, whole genome shotgun sequence

⇒Summary: seq-len = 554 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-91 bp Zoom in on locus 1 x2 CRISPR array Location: 3-91 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 3-91 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3-91 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)