CRISPRone

CRISPRone report for GCA_900708825.1_NAV01-021

♦ Seq 1: CAADQU010000827.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_1297_length_8658_cov_56.677753, whole genome shotgun sequence

⇒Summary: seq-len = 8688 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-8411 bp Zoom in on locus 1 x2 CRISPR array Location: 1-89 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1-89 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09739:cas6f Type: other Location: 272-835 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 839-1867 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1878-2861 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2848-4152 bp Gene: COG1203:cas3 Type: Type-I Location: 4210-7440 bp Gene: cd09718:cas1 Type: universal Location: 7437-8411 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1-89 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAADQU010001266.1 Pseudomonas aeruginosa isolate XDR-PA genome assembly, contig: NODE_2210_length_618_cov_61.482201, whole genome shotgun sequence

⇒Summary: seq-len = 648 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-90 bp Zoom in on locus 1 x2 CRISPR array Location: 2-90 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 2-90 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2-90 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)