CRISPRone

CRISPRone report for GCA_901002035.1_4995_2_4

♦ Seq 1: CAAJLK010000002.1 Clostridioides difficile strain Gla015 genome assembly, contig: ERS009001SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 596357 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299404-300030 bp]: array | spacers
           [Locus range 341650-341745 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAJLK010000007.1 Clostridioides difficile strain Gla015 genome assembly, contig: ERS009001SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 166341 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53208-54031 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAJLK010000004.1 Clostridioides difficile strain Gla015 genome assembly, contig: ERS009001SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 236900 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAJLK010000011.1 Clostridioides difficile strain Gla015 genome assembly, contig: ERS009001SCcontig000011, whole genome shotgun sequence

⇒Summary: seq-len = 141000 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113403-115020 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAAJLK010000003.1 Clostridioides difficile strain Gla015 genome assembly, contig: ERS009001SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 289873 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 947-1905 bp]: array | spacers
           [Locus range 210293-210980 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAAJLK010000001.1 Clostridioides difficile strain Gla015 genome assembly, contig: ERS009001SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 597143 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 525954-526577 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAAJLK010000009.1 Clostridioides difficile strain Gla015 genome assembly, contig: ERS009001SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 149047 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30689-30983 bp]: array | spacers
           [Locus range 123366-123723 bp]: array | spacers
           [Locus range 125587-125877 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)