CRISPRone

CRISPRone report for GCA_901002045.1_4880_7_10

♦ Seq 1: CAAJLY010000008.1 Clostridioides difficile strain Lew010 genome assembly, contig: ERS007227SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 149068 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23198-23487 bp]: array | spacers
           [Locus range 25352-25708 bp]: array | spacers
           [Locus range 118092-118385 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAJLY010000009.1 Clostridioides difficile strain Lew010 genome assembly, contig: ERS007227SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 140973 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 25976-27594 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAJLY010000004.1 Clostridioides difficile strain Lew010 genome assembly, contig: ERS007227SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 236325 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAJLY010000002.1 Clostridioides difficile strain Lew010 genome assembly, contig: ERS007227SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 353662 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 11895-11989 bp]: array | spacers
           [Locus range 53610-54235 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAAJLY010000001.1 Clostridioides difficile strain Lew010 genome assembly, contig: ERS007227SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 370336 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 69537-70159 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAAJLY010000033.1 Clostridioides difficile strain Lew010 genome assembly, contig: ERS007227SCcontig000033, whole genome shotgun sequence

⇒Summary: seq-len = 25873 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5462-6285 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAAJLY010000003.1 Clostridioides difficile strain Lew010 genome assembly, contig: ERS007227SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 286720 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 75854-76540 bp]: array | spacers
           [Locus range 284929-285886 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)