CRISPRone

CRISPRone report for GCA_901002495.1_4995_1_10

♦ Seq 1: CAAJNH010000002.1 Clostridioides difficile strain Gla010 genome assembly, contig: ERS008995SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 373307 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 302102-302725 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAJNH010000005.1 Clostridioides difficile strain Gla010 genome assembly, contig: ERS008995SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 290307 bp; # of CRISPR array = 2; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 79458-80144 bp]: array | spacers
           [Locus range 288533-289490 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAJNH010000007.1 Clostridioides difficile strain Gla010 genome assembly, contig: ERS008995SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 149080 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23205-23494 bp]: array | spacers
           [Locus range 25359-25715 bp]: array | spacers
           [Locus range 118099-118392 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAJNH010000003.1 Clostridioides difficile strain Gla010 genome assembly, contig: ERS008995SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 366863 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAAJNH010000001.1 Clostridioides difficile strain Gla010 genome assembly, contig: ERS008995SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 878798 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 415318-415944 bp]: array | spacers
           [Locus range 457564-457659 bp]: array | spacers
           [Locus range 765436-766259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAAJNH010000010.1 Clostridioides difficile strain Gla010 genome assembly, contig: ERS008995SCcontig000010, whole genome shotgun sequence

⇒Summary: seq-len = 141033 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113436-115053 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)