CRISPRone

CRISPRone report for GCA_901002565.1_4995_1_4

♦ Seq 1: CAAJNK010000004.1 Clostridioides difficile strain Gla004 genome assembly, contig: ERS008989SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 236903 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAJNK010000001.1 Clostridioides difficile strain Gla004 genome assembly, contig: ERS008989SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 596373 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299413-300039 bp]: array | spacers
           [Locus range 341659-341754 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAJNK010000011.1 Clostridioides difficile strain Gla004 genome assembly, contig: ERS008989SCcontig000011, whole genome shotgun sequence

⇒Summary: seq-len = 142729 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113403-115020 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAJNK010000007.1 Clostridioides difficile strain Gla004 genome assembly, contig: ERS008989SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 172277 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53206-54029 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAAJNK010000009.1 Clostridioides difficile strain Gla004 genome assembly, contig: ERS008989SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 149083 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30692-30986 bp]: array | spacers
           [Locus range 123369-123726 bp]: array | spacers
           [Locus range 125590-125880 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAAJNK010000002.1 Clostridioides difficile strain Gla004 genome assembly, contig: ERS008989SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 424963 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 354805-355428 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAAJNK010000003.1 Clostridioides difficile strain Gla004 genome assembly, contig: ERS008989SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 290084 bp; # of CRISPR array = 2; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 963-1921 bp]: array | spacers
           [Locus range 210309-210996 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)