CRISPRone

CRISPRone report for GCA_901004485.1_7614_4_50

♦ Seq 1: CAAJUX010000006.1 Clostridioides difficile strain lsh13 genome assembly, contig: ERS080217SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 206465 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 115275-115567 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAJUX010000005.1 Clostridioides difficile strain lsh13 genome assembly, contig: ERS080217SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 211907 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 189920-190213 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAJUX010000001.1 Clostridioides difficile strain lsh13 genome assembly, contig: ERS080217SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 1177895 bp; # of CRISPR array = 3; # of cas gene = 7 (type I, III)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 247546-248106 bp]: array | spacers
           [Locus range 498334-498818 bp]: array | spacers
           [Locus range 924336-924564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAJUX010000007.1 Clostridioides difficile strain lsh13 genome assembly, contig: ERS080217SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 171175 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 56641-58057 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAAJUX010000002.1 Clostridioides difficile strain lsh13 genome assembly, contig: ERS080217SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 673526 bp; # of CRISPR array = 1; # of cas gene = 9 (type I)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
[Locus range 418941-420618 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAAJUX010000025.1 Clostridioides difficile strain lsh13 genome assembly, contig: ERS080217SCcontig000025, whole genome shotgun sequence

⇒Summary: seq-len = 11264 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1940-2301 bp]: array | spacers
           [Locus range 4944-5237 bp]: array | spacers
           [Locus range 7648-7743 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAAJUX010000013.1 Clostridioides difficile strain lsh13 genome assembly, contig: ERS080217SCcontig000013, whole genome shotgun sequence

⇒Summary: seq-len = 123329 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 23742-24031 bp]: array | spacers
[Locus range 104584-105137 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)