CRISPRone

CRISPRone report for GCA_901004525.1_7614_4_58

♦ Seq 1: CAAJVB010000004.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 228358 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 46041-46136 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAJVB010000025.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000025, whole genome shotgun sequence

⇒Summary: seq-len = 65913 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47265-47692 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAJVB010000002.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 334432 bp; # of CRISPR array = 3; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 168164-169314 bp]: array | spacers
           [Locus range 279762-280191 bp]: array | spacers
           [Locus range 321800-322030 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAJVB010000012.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000012, whole genome shotgun sequence

⇒Summary: seq-len = 124909 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 26579-28526 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAAJVB010000005.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 222900 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 94087-94247 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAAJVB010000024.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000024, whole genome shotgun sequence

⇒Summary: seq-len = 67285 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAAJVB010000007.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 150018 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 32475-32750 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CAAJVB010000027.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000027, whole genome shotgun sequence

⇒Summary: seq-len = 61929 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 57398-58086 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: CAAJVB010000022.1 Clostridioides difficile strain lsh22 genome assembly, contig: ERS080225SCcontig000022, whole genome shotgun sequence

⇒Summary: seq-len = 72146 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24436-24531 bp]: array | spacers
           [Locus range 24631-25098 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)