CRISPRone
CRISPRone report for GCA_901004605.1_7614_4_71
♦ Seq 1: CAAJVJ010000001.1 Clostridioides difficile strain lsh35 genome assembly, contig: ERS080238SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 733034 bp; # of CRISPR array = 2; # of cas gene = 6 (type I, III) 
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 235519-235875 bp]: array | spacers
[Locus range 478971-479924 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: CAAJVJ010000009.1 Clostridioides difficile strain lsh35 genome assembly, contig: ERS080238SCcontig000009, whole genome shotgun sequence
⇒Summary: seq-len = 211963 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 90949-91375 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAJVJ010000003.1 Clostridioides difficile strain lsh35 genome assembly, contig: ERS080238SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 343379 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 17704-18196 bp]: array | spacers
[Locus range 109069-109295 bp]: array | spacers
[Locus range 109897-110717 bp]: array | spacers
[Locus range 114179-114404 bp]: array | spacers
[Locus range 285154-286892 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAJVJ010000016.1 Clostridioides difficile strain lsh35 genome assembly, contig: ERS080238SCcontig000016, whole genome shotgun sequence
⇒Summary: seq-len = 59622 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 44898-46172 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 90949-91375 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAJVJ010000003.1 Clostridioides difficile strain lsh35 genome assembly, contig: ERS080238SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 343379 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 17704-18196 bp]: array | spacers
[Locus range 109069-109295 bp]: array | spacers
[Locus range 109897-110717 bp]: array | spacers
[Locus range 114179-114404 bp]: array | spacers
[Locus range 285154-286892 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAJVJ010000016.1 Clostridioides difficile strain lsh35 genome assembly, contig: ERS080238SCcontig000016, whole genome shotgun sequence
⇒Summary: seq-len = 59622 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 44898-46172 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 44898-46172 bp]: array | spacers