CRISPRone

CRISPRone report for GCA_901004975.1_7614_7_43

♦ Seq 1: CAAJWT010000014.1 Clostridioides difficile strain lsh06 genome assembly, contig: ERS080210SCcontig000014, whole genome shotgun sequence

⇒Summary: seq-len = 84977 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 66393-66819 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAJWT010000017.1 Clostridioides difficile strain lsh06 genome assembly, contig: ERS080210SCcontig000017, whole genome shotgun sequence

⇒Summary: seq-len = 53778 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31474-31768 bp]: array | spacers
           [Locus range 33566-33659 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAJWT010000013.1 Clostridioides difficile strain lsh06 genome assembly, contig: ERS080210SCcontig000013, whole genome shotgun sequence

⇒Summary: seq-len = 90175 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13048-13273 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAJWT010000001.1 Clostridioides difficile strain lsh06 genome assembly, contig: ERS080210SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 1103276 bp; # of CRISPR array = 3; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 247196-248414 bp]: array | spacers
           [Locus range 495374-496991 bp]: array | spacers
           [Locus range 846741-846835 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAAJWT010000002.1 Clostridioides difficile strain lsh06 genome assembly, contig: ERS080210SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 756893 bp; # of CRISPR array = 2; # of cas gene = 14  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 296575-297391 bp]: array | spacers
           [Locus range 506272-508928 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAAJWT010000003.1 Clostridioides difficile strain lsh06 genome assembly, contig: ERS080210SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 311688 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 120869-122089 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAAJWT010000012.1 Clostridioides difficile strain lsh06 genome assembly, contig: ERS080210SCcontig000012, whole genome shotgun sequence

⇒Summary: seq-len = 97627 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38230-41036 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CAAJWT010000005.1 Clostridioides difficile strain lsh06 genome assembly, contig: ERS080210SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 211258 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91109-92193 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)