CRISPRone

CRISPRone report for GCA_901005785.1_8140_6_11

♦ Seq 1: CAAJZT010000003.1 Clostridioides difficile strain LSHTM-11 genome assembly, contig: ERS139986SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 345315 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 98011-98237 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAJZT010000001.1 Clostridioides difficile strain LSHTM-11 genome assembly, contig: ERS139986SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 528882 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 164109-164528 bp]: array | spacers
           [Locus range 295918-296078 bp]: array | spacers
           [Locus range 298746-298972 bp]: array | spacers
           [Locus range 389822-390441 bp]: array | spacers
           [Locus range 499701-499861 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAJZT010000002.1 Clostridioides difficile strain LSHTM-11 genome assembly, contig: ERS139986SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 377198 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182962-183056 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)