CRISPRone
CRISPRone report for GCA_901005865.1_8140_6_23
♦ Seq 1: CAAKAD010000001.1 Clostridioides difficile strain LSHTM-23 genome assembly, contig: ERS139950SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 585395 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III) 
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 98220-98446 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: CAAKAD010000005.1 Clostridioides difficile strain LSHTM-23 genome assembly, contig: ERS139950SCcontig000005, whole genome shotgun sequence
⇒Summary: seq-len = 242706 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 9650-9810 bp]: array | spacers
[Locus range 12478-12704 bp]: array | spacers
[Locus range 103554-104173 bp]: array | spacers
[Locus range 213433-213593 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAKAD010000002.1 Clostridioides difficile strain LSHTM-23 genome assembly, contig: ERS139950SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 372841 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 182399-182493 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAKAD010000006.1 Clostridioides difficile strain LSHTM-23 genome assembly, contig: ERS139950SCcontig000006, whole genome shotgun sequence
⇒Summary: seq-len = 218980 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 164259-164678 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 9650-9810 bp]: array | spacers
[Locus range 12478-12704 bp]: array | spacers
[Locus range 103554-104173 bp]: array | spacers
[Locus range 213433-213593 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAKAD010000002.1 Clostridioides difficile strain LSHTM-23 genome assembly, contig: ERS139950SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 372841 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 182399-182493 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAKAD010000006.1 Clostridioides difficile strain LSHTM-23 genome assembly, contig: ERS139950SCcontig000006, whole genome shotgun sequence
⇒Summary: seq-len = 218980 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 164259-164678 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 164259-164678 bp]: array | spacers