CRISPRone

CRISPRone report for GCA_901005885.1_8140_6_26

♦ Seq 1: CAAKAF010000002.1 Clostridioides difficile strain LSHTM-26 genome assembly, contig: ERS139951SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 376672 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 194180-194275 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKAF010000001.1 Clostridioides difficile strain LSHTM-26 genome assembly, contig: ERS139951SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 511705 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 147164-147583 bp]: array | spacers
           [Locus range 278973-279133 bp]: array | spacers
           [Locus range 281801-282027 bp]: array | spacers
           [Locus range 372877-373496 bp]: array | spacers
           [Locus range 482756-482916 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKAF010000003.1 Clostridioides difficile strain LSHTM-26 genome assembly, contig: ERS139951SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 345161 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 97939-98165 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)