CRISPRone

CRISPRone report for GCA_901005905.1_8140_6_27

♦ Seq 1: CAAKAH010000002.1 Clostridioides difficile strain LSHTM-27 genome assembly, contig: ERS139873SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 372841 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190349-190444 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKAH010000001.1 Clostridioides difficile strain LSHTM-27 genome assembly, contig: ERS139873SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 528862 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28854-29015 bp]: array | spacers
           [Locus range 138274-138894 bp]: array | spacers
           [Locus range 229743-229970 bp]: array | spacers
           [Locus range 232637-232798 bp]: array | spacers
           [Locus range 364185-364605 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKAH010000003.1 Clostridioides difficile strain LSHTM-27 genome assembly, contig: ERS139873SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 345301 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 98011-98237 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)