CRISPRone
CRISPRone report for GCA_901005935.1_8140_6_30
♦ Seq 1: CAAKAK010000006.1 Clostridioides difficile strain LSHTM-30 genome assembly, contig: ERS139876SCcontig000006, whole genome shotgun sequence
⇒Summary: seq-len = 170233 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR
)
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 5706-6126 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: CAAKAK010000001.1 Clostridioides difficile strain LSHTM-30 genome assembly, contig: ERS139876SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 585027 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 97931-98157 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAKAK010000003.1 Clostridioides difficile strain LSHTM-30 genome assembly, contig: ERS139876SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 256867 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 28710-28871 bp]: array | spacers
[Locus range 138100-138720 bp]: array | spacers
[Locus range 229569-229796 bp]: array | spacers
[Locus range 232463-232624 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAKAK010000002.1 Clostridioides difficile strain LSHTM-30 genome assembly, contig: ERS139876SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 372832 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 190349-190444 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 97931-98157 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAKAK010000003.1 Clostridioides difficile strain LSHTM-30 genome assembly, contig: ERS139876SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 256867 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 28710-28871 bp]: array | spacers
[Locus range 138100-138720 bp]: array | spacers
[Locus range 229569-229796 bp]: array | spacers
[Locus range 232463-232624 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAKAK010000002.1 Clostridioides difficile strain LSHTM-30 genome assembly, contig: ERS139876SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 372832 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 190349-190444 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 190349-190444 bp]: array | spacers