CRISPRone

CRISPRone report for GCA_901005955.1_8140_6_31

♦ Seq 1: CAAKAL010000034.1 Clostridioides difficile strain LSHTM-31 genome assembly, contig: ERS139877SCcontig000034, whole genome shotgun sequence

⇒Summary: seq-len = 11516 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8155-8643 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKAL010000003.1 Clostridioides difficile strain LSHTM-31 genome assembly, contig: ERS139877SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 376702 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182455-182549 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKAL010000001.1 Clostridioides difficile strain LSHTM-31 genome assembly, contig: ERS139877SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 600721 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 502284-502509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAKAL010000002.1 Clostridioides difficile strain LSHTM-31 genome assembly, contig: ERS139877SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 483868 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 164259-164678 bp]: array | spacers
           [Locus range 344716-345335 bp]: array | spacers
           [Locus range 454595-454755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)