CRISPRone

CRISPRone report for GCA_901005985.1_8140_6_36

♦ Seq 1: CAAKAN010000003.1 Clostridioides difficile strain LSHTM-36 genome assembly, contig: ERS139882SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 345142 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 246987-247212 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKAN010000002.1 Clostridioides difficile strain LSHTM-36 genome assembly, contig: ERS139882SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 376459 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182399-182493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKAN010000001.1 Clostridioides difficile strain LSHTM-36 genome assembly, contig: ERS139882SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 483314 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 164109-164528 bp]: array | spacers
           [Locus range 344566-345185 bp]: array | spacers
           [Locus range 454445-454605 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAKAN010000047.1 Clostridioides difficile strain LSHTM-36 genome assembly, contig: ERS139882SCcontig000047, whole genome shotgun sequence

⇒Summary: seq-len = 5472 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4417-4905 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)