CRISPRone

CRISPRone report for GCA_901005995.1_8140_6_3

♦ Seq 1: CAAKAR010000003.1 Clostridioides difficile strain LSHTM-3 genome assembly, contig: ERS139849SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 345220 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
[Locus range 97935-98161 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKAR010000001.1 Clostridioides difficile strain LSHTM-3 genome assembly, contig: ERS139849SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 528570 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28710-28871 bp]: array | spacers
           [Locus range 138130-138750 bp]: array | spacers
           [Locus range 229599-229826 bp]: array | spacers
           [Locus range 232493-232654 bp]: array | spacers
           [Locus range 364043-364463 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKAR010000002.1 Clostridioides difficile strain LSHTM-3 genome assembly, contig: ERS139849SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 376461 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 182399-182493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)