CRISPRone

CRISPRone report for GCA_901006025.1_8140_6_50

♦ Seq 1: CAAKAT010000002.1 Clostridioides difficile strain LSHTM-50 genome assembly, contig: ERS139959SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 345922 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 98653-98879 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKAT010000001.1 Clostridioides difficile strain LSHTM-50 genome assembly, contig: ERS139959SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 377219 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182962-183056 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKAT010000004.1 Clostridioides difficile strain LSHTM-50 genome assembly, contig: ERS139959SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 293401 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 128874-129294 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAKAT010000006.1 Clostridioides difficile strain LSHTM-50 genome assembly, contig: ERS139959SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 244940 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28859-29020 bp]: array | spacers
           [Locus range 138279-138899 bp]: array | spacers
           [Locus range 229748-229975 bp]: array | spacers
           [Locus range 232642-232803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)