CRISPRone

CRISPRone report for GCA_901006035.1_8140_6_46

♦ Seq 1: CAAKAS010000002.1 Clostridioides difficile strain LSHTM-46 genome assembly, contig: ERS139892SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 345347 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 247031-247256 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKAS010000001.1 Clostridioides difficile strain LSHTM-46 genome assembly, contig: ERS139892SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 373107 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182959-183053 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKAS010000003.1 Clostridioides difficile strain LSHTM-46 genome assembly, contig: ERS139892SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 293403 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 128876-129296 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAKAS010000004.1 Clostridioides difficile strain LSHTM-46 genome assembly, contig: ERS139892SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 244942 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12141-12301 bp]: array | spacers
           [Locus range 14969-15195 bp]: array | spacers
           [Locus range 106045-106664 bp]: array | spacers
           [Locus range 215924-216084 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)