CRISPRone

CRISPRone report for GCA_901006075.1_8140_6_47

♦ Seq 1: CAAKAV010000002.1 Clostridioides difficile strain LSHTM-47 genome assembly, contig: ERS139980SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 372547 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182399-182493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKAV010000001.1 Clostridioides difficile strain LSHTM-47 genome assembly, contig: ERS139980SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 528882 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 29022-29183 bp]: array | spacers
           [Locus range 138442-139062 bp]: array | spacers
           [Locus range 229911-230138 bp]: array | spacers
           [Locus range 232805-232966 bp]: array | spacers
           [Locus range 364355-364775 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKAV010000003.1 Clostridioides difficile strain LSHTM-47 genome assembly, contig: ERS139980SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 345149 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 246990-247215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)