CRISPRone
CRISPRone report for GCA_901006205.1_8140_6_71
♦ Seq 1: CAAKBM010000003.1 Clostridioides difficile strain LSHTM-71 genome assembly, contig: ERS139966SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 294024 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR
)
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 164109-164528 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: CAAKBM010000005.1 Clostridioides difficile strain LSHTM-71 genome assembly, contig: ERS139966SCcontig000005, whole genome shotgun sequence
⇒Summary: seq-len = 244269 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 28710-28871 bp]: array | spacers
[Locus range 138130-138750 bp]: array | spacers
[Locus range 229599-229826 bp]: array | spacers
[Locus range 232493-232654 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAKBM010000001.1 Clostridioides difficile strain LSHTM-71 genome assembly, contig: ERS139966SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 600419 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 502262-502487 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAKBM010000002.1 Clostridioides difficile strain LSHTM-71 genome assembly, contig: ERS139966SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 373144 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 190652-190747 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 28710-28871 bp]: array | spacers
[Locus range 138130-138750 bp]: array | spacers
[Locus range 229599-229826 bp]: array | spacers
[Locus range 232493-232654 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAKBM010000001.1 Clostridioides difficile strain LSHTM-71 genome assembly, contig: ERS139966SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 600419 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 502262-502487 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAKBM010000002.1 Clostridioides difficile strain LSHTM-71 genome assembly, contig: ERS139966SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 373144 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 190652-190747 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 190652-190747 bp]: array | spacers