CRISPRone

CRISPRone report for GCA_901006215.1_8140_6_6

♦ Seq 1: CAAKBL010000003.1 Clostridioides difficile strain LSHTM-6 genome assembly, contig: ERS139852SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 345170 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
[Locus range 247011-247236 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKBL010000001.1 Clostridioides difficile strain LSHTM-6 genome assembly, contig: ERS139852SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 528800 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 164259-164678 bp]: array | spacers
           [Locus range 296068-296228 bp]: array | spacers
           [Locus range 298896-299122 bp]: array | spacers
           [Locus range 389972-390591 bp]: array | spacers
           [Locus range 499851-500011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKBL010000002.1 Clostridioides difficile strain LSHTM-6 genome assembly, contig: ERS139852SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 372547 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 190055-190150 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)