CRISPRone

CRISPRone report for GCA_901006255.1_8140_6_78

♦ Seq 1: CAAKBN010000003.1 Clostridioides difficile strain LSHTM-78 genome assembly, contig: ERS139924SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 293399 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 128872-129292 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKBN010000002.1 Clostridioides difficile strain LSHTM-78 genome assembly, contig: ERS139924SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 345168 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 97933-98159 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKBN010000001.1 Clostridioides difficile strain LSHTM-78 genome assembly, contig: ERS139924SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 372547 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190055-190150 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAAKBN010000005.1 Clostridioides difficile strain LSHTM-78 genome assembly, contig: ERS139924SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 244427 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28859-29020 bp]: array | spacers
           [Locus range 138279-138899 bp]: array | spacers
           [Locus range 229748-229975 bp]: array | spacers
           [Locus range 232642-232803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)