CRISPRone

CRISPRone report for GCA_901006385.1_8140_6_91

♦ Seq 1: CAAKCD010000003.1 Clostridioides difficile strain LSHTM-91 genome assembly, contig: ERS139937SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 373063 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182399-182493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAAKCD010000002.1 Clostridioides difficile strain LSHTM-91 genome assembly, contig: ERS139937SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 537091 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 29114-29275 bp]: array | spacers
           [Locus range 138533-139021 bp]: array | spacers
           [Locus range 229870-230097 bp]: array | spacers
           [Locus range 232764-232925 bp]: array | spacers
           [Locus range 372414-372834 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAAKCD010000001.1 Clostridioides difficile strain LSHTM-91 genome assembly, contig: ERS139937SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 585118 bp; # of CRISPR array = 1; # of cas gene = 10  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 98011-98237 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)